Package: tripsAndDipR
Type: Package
Title: Inference of Ploidy from Sequencing Data
Version: 0.2.0
Authors@R: person("Thomas", "Delomas", email = "thomas.delomas@usda.gov",
  role = c("aut", "cre"))
Description: Uses read counts for biallelic single nucleotide
        polymorphisms (SNPs) to infer ploidy. It allows parameters to
        be specified to account for sequencing error rates and allelic
        bias. For details of the algorithms, please see Delomas (2019)
        <doi:10.1111/1755-0998.13073> and Delomas et al. (2021)
        <doi:10.1111/1755-0998.13431>.
Imports: stats, Rcpp (>= 1.0.2)
SystemRequirements: C++11
LinkingTo: Rcpp
URL: https://github.com/delomast/tripsAndDipR
BugReports: https://github.com/delomast/tripsAndDipR/issues
License: MIT + file LICENSE
Encoding: UTF-8
RoxygenNote: 7.1.1
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
Repository: https://delomast.r-universe.dev
Date/Publication: 2023-04-19 20:04:06 UTC
RemoteUrl: https://github.com/delomast/tripsanddipr
RemoteRef: HEAD
RemoteSha: 291d186426b6fbd1adf6623811241bf3c63c664d
NeedsCompilation: yes
Packaged: 2026-10-20 06:39:49 UTC; root
Author: Thomas Delomas [aut, cre]
Maintainer: Thomas Delomas <thomas.delomas@usda.gov>